Year

Selected publications of all members:

2011

2010

2009

2008

2007

2006

2005

2004

Agarwal, N.K., Mueller, G.A., Mueller, C., Streich, J.H., Asif, A.R., and Dihazi, H. (2010) Expression proteomics of acute promyelocytic leukaemia cells treated with methotrexate. Biochim Biophys Acta 1804, 918-928.

Asif, A.R., Oellerich, M., Amstrong, V.W., Gross, U., and Reichard, U. (2010) Analysis of the cellular Aspergillus fumigatus proteome that reacts with sera from rabbits developing an acquired immunity after experimental aspergillosis. Electrophoresis 31, 1947-1958.

Burgalossi, A., Jung, S., Meyer, G., Jockusch, W.J., Jahn, O., Taschenberger, H., O'Connor, V.M., Nishiki, T., Takahashi, M., Brose, N., Rhee, J.-S. (2010) SNARE protein recycling by aSNAP and bSNAP supports synaptic vesicle priming. Neuron 68, 473-487.

Damme, M., Morelle, W., Schmidt, B., Andersson, C., Fogh, J., Michalski, J.C. and Lübke, T. (2010) Impaired lysosomal trimming of N-linked oligosaccharides leads to hyperglycosylation of native lysosomal proteins in mannosidosis mice. Mol Cell Biol 30, 273-283.

Dihazi, G.H., and Dihazi, H. (2010) Protein-protein interaction networks improve the proteomics data interpretation in induced apoptosis. Expert Rev Proteomics 7, 177-180.

Gawinecka, J., Dieks, J., Asif, A.R., Carimalo, J., Heinemann, U., Streich, J.H., Dihazi, H., Schulz-Schaeffer, W., Zerr, I. (2010) Codon 129 polymorphism specific cerebrospinal fluid proteome pattern in sporadic Creutzfeldt-Jakob disease and the implication of glycolytic enzymes in prion-induced pathology. J Proteome Res 9, 5646-5657.

Geoui, T., Urlaub, H., Plessmann, U., Porschewski, P. (2010) Extraction of proteins from formalin-fixed, paraffin-embedded tissue using the Qproteome extraction technique and preparation of tryptic peptides for liquid chromatography/mass spectrometry analysis., Curr Protoc Mol Biol, Chapter 10:Unit 10.27., pp 1-12.

Ghalei, H., Hsiao, H.­-H., Urlaub, H., Wahl, M.C., Watkins, N.J. (2010) A novel Nop5-sRNA interaction that is required for efficient archaeal box C/D sRNP formation. RNA 16, 2341-2348.

Gronborg, M., Pavlos, N., Brunk, I., Chua, J., Münster-Wandowski, A., Riedel, D., Ahnert-Hilger, G., Urlaub, H.*, Jahn, R. (2010) Quantitative comparison of glutamatergic and GABAergic synaptic vesicles unveils selectivity for few proteins including MAL2, a novel synaptic vesicle protein, J Neurosci 30, 2-12. *co-corresponding author

Hsiao, H.-H., Urlaub, H. (2010) Pseudo-neutral-loss scan for selective detection of phosphopeptides and N-glycopeptides using liquid chromatography coupled with a hybrid linear ion-trap/orbitrap mass spectrometer. Proteomics 10, 3916-3921.

Hruzik, A., Asif, A.R., Groß, U. (2010) Identification of Toxoplasma gondii antigen SUB1 as a marker for the acute infection using an innovative evaluation method. J Clin Microbiol 49, 2419-2425.

Jesse, S., Steinacker, P., Lehnert, S., Sdzuj, M., Cepek, L., Tumani, H., Jahn, O., Schmidt, H., and Otto, M. (2010) A proteomic approach for the diagnosis of bacterial meningitis. PLoS One 5, e10079.

Kawabe, H., Neeb, A., Dimova, K., Young, S.M., Takeda, M., Katsurabayashi, S., Mitkovski, M., Malakhova, O.A., Zhang, D.-E., Umikawa, M., Kariya, K., Goebbels, S., Nave, K.-A., Rosenmund, C., Jahn, O., Rhee, J.-S., and Brose, N. (2010) Regulation of Rap2A by the ubiquitin ligase Nedd4-1 controls neurite development. Neuron 65, 358-372.

Knoferle, J., Ramljak, S., Koch, J.C., Tonges, L., Asif, A.R., Michel, U., Wouters, F.S., Heermann, S., Krieglstein, K., Zerr, I., Bahr, M., and Lingor, P. (2010) TGF-ss 1 enhances neurite outgrowth via regulation of proteasome function and EFABP. Neurobiol Dis

Kühn-Hölsken, E., Lenz, C., Dickmanns, A., Hsiao, H.-H., Richter, F.M., Kastner, B., Ficner, R., Urlaub, H. (2010) Mapping the binding site of snurportin 1 on native U1 snRNP by cross-linking and mass spectrometry. Nucleic Acids Res 38, 5581-5593.

Löber, J., Claußen, M., Jahn, O., Pieler, T. (2010) Interactions of 42Sp50 with the vegetal RNA localization machinery in Xenopus laevis oocytes. FEBS J 277, 4722-4731.

Mischak, H., Kolch, W., Aivaliotis, M., Bouyssié, D., Court, M., Dihazi, H., Dihazi, G.H., Franke, J., Garin, J., de Peredo, A.G., Iphöfer, A., Jänsch, L., Lacroix, C., Makridakis, M., Masselon, C., Metzger, J., Monsarrat, B., Mrug, M., Norling, M., Novak, J., Pich, A., Pitt, A., Bongcam-Rudloff, E,. Siwy, J., Suzuki, H., Thongboonkerd, V., Wang, L., Zoidakis, J., Zürbig, P., Joost P.S., and Vlahou A. (2010) Comprehensive human urine standards for comparability and standardization in clinical proteome analysis. Proteomics-Clinical Applications. (in press)

Nahlik, K., Dumkow, M., Bayram, O., Helmstaedt, K., Busch, S., Valerius, O., Gerke, J., Hoppert, M., Schwier, E., Opitz, L., Westermann, M., Grond, S., Feussner, K., Goebel, C., Kaever, A., Meinicke, P., Feussner, I., and Braus, G.H. (2010) The COP9 signalosome mediates transcriptional and metabolic response to hormones, oxidative stress protection and cell wall rearrangement during fungal development. Mol Microbiol 78, 964-979.

Richter, F.M., Sander, B., Golas, M.M., Stark, H., Urlaub, H. (2010) Merging molecular electron microscopy and mass spectrometry by carbon film-assisted endoproteinase digestion. Mol Cell Proteomics 9, 1729-1741. 

Rodriguez-Castaneda, F., Maestre-Martinez, M., Coudevylle, N., Dimova, K., Junge, H., Lipstein, N., Lee, D., Becker, S., Brose, N., Jahn, O., Carlomagno, T., and Griesinger, C. (2010) Modular architecture of Munc13/calmodulin complexes: Dual regulation by Ca²⁺ and possible function in short-term synaptic plasticity. EMBO J 29, 680-691.

Sarikaya Bayram, O., Bayram, O., Valerius, O., Park, H.S., Irniger, S., Gerke, J., Ni, M., Han, K.H., Yu, J.H., and Braus G.H. (2010) LaeA control of velvet family regulatory proteins for light-dependent development and fungal cell-type specificity. PLoS Genet 6, e1001226.

Schmidt, C., Lenz, C., Grote, M., Lührmann, R., Urlaub, H. (2010) Determination of protein stoichiometry within protein complexes using absolute quantification and multiple reaction monitoring. Anal Chem 82, 2784-2796.

Schneider, M., Hsaio, H.-H., Will, C.L., Giet, R., Urlaub, H., Lührmann, R. (2010) Human Prp4 kinase is required for stable tri-snRNP association during spliceosomal B complex formation, Nat Struct Mol Biol 17, 216-221.

Schneider, M., Will, C.L., Anokhina, M., Tazi, J., Urlaub, H., Lührmann, R. (2010) Exon definition complexes contain the tri-snRNP and can be directly converted into B-like precatalytic splicing complexes. Mol Cell 38, 223-235.

Schott, P., Jacobshagen, C., Kohler, J., Seidler, T., Asif, A.R., Dihazi, H., Hasenfuss, G., and Maier, L. S. (2010) Proteome changes in CaMKIIdelta(C)-overexpressing cardiac myocytes. Cardiovasc Pathol

Schultze, F.C., Petrova, D.T., Oellerich, M., Armstrong, V.W., and Asif, A.R. (2010) Differential early signatures of protein and phosphoprotein amount in human T-lymphoblast cells induced by sirolimus. Cell Prolif 43, 396-404.

Singh, B., Oellerich, M., Kumar, R., Kumar, M., Bhadoria, D.P., Reichard, U., Gupta, V.K., Sharma, G.L., Asif, A.R. (2010) Immuno-reactive molecules identified from the secreted proteome of Aspergillus fumigatus. J Proteome Res 9(11), 5517-29.

Singh, B., Sharma, G.L., Oellerich, M., Kumar, R., Singh, S., Bhadoria, D.P., Katyal, A., Reichard, U., Asif, A.R. (2010) Novel cytosolic allergens of Aspergillus fumigatus identified from germinating conidia. J Proteome Res 9(11), 5530-41.

Steinacker, P., Hawlik, A., Lehnert, S., Jahn, O., Meier, S., Görz, E., Braunstein, K.E., Krzovska, M., Schwalenstöcker, B., Jesse, S., Pröpper, C., Böckers, T., Ludolph, A., and Otto, M. (2010) Neuroprotective function of cellular prion protein in a mouse model of amyotrophic lateral sclerosis. Am J Pathol 176, 1409-1420.

Werner, H.B., and Jahn, O. (2010) Myelin matters: Proteomic insights into white matter disorders. Expert Rev Proteomics 7, 159-164.